Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929388.1_cds_XP_016476687.1_68494
CDS Infomation

[gene=LOC107798229] [db_xref=GeneID:107798229] [protein=uncharacterized protein LOC107798229] [protein_id=XP_016476687.1] [location=join(48283..48336,49402..49488,50810..50899,52220..52300,52445..52639,52771..54903,56228..56374,57300..57685,57997..58129)] [gbkey=CDS]
Sequence

ATGAATTCAGATGTCAACAGAGCTAGTGGAACAGTTGAAAGAGATATTGAACAGGCGATA
ACCGCTCTAAAGAAGGGGGCATGTTTGCTGAAGTATGGAAGAAGGGGAAAGCCAAAGTTT
TGCCCCTTTCGTCTGGCAAATGATGAGTCTGCTCTGATATGGTTTTCTGGTAAAGAGGAG
AAACACCTTAAGCTAAGTCACGTGTCAAGAATAATATCTGGACAGCGCACTCCAATATTT
CAAAGGCACCCACGACCTGAGAAGGAGTACCAATCTTTTTCACTCATATACAATGATAGA
TCACTGGATTTGATATGCAAAGATAAAGACGAAGCAGAGGTATGGTTTAGTGGCTTGAAG
GCTTTAATCTCACGTGGACACCAGCGAAAGTGGAGAACAGAATCAAGGAGCGATGGAGTT
CCTTCTGGTGCTACTAGTCCCAGAACATATACGCGGAGAAACTCTCCTCTTCATTCTCCT
TTTGGTAGTGGTGATAGTTCGCAGAAGGATGGTGGTGATCAGCTTCGCCTTCATAGTCCA
TATGGAAGCCCACCTAAAAATGGTGTAAATAAGGCATTCTCTGACATAATTCACTATAGT
TTACCTCCCAAGGGCCTTTTCACTTCAGATGCTGCTAGTGCTTCTATTCATTCCTTATCT
TCTGGAGGTTCAGATAGCATACATGGTCAGATGAAGGCAATGGGTATGGATAACTTTAGA
GTAAGCCTTTCAAGTGGTGTTAGCTCATCAAGTCAAGGTTCTGGTCATGATGATGGTGAT
GCACTGGGGGATGTTTTTATCTGGGGGGAAGGGACTGCGGATGGTGTACTAGGTGGTGGA
CCTCATAGGATTGGCAGTTGTAATGGTGTCAAAGTAGATTCTTTATTGCCCAAAGCTTTA
GAGTCTGCAGTGGTACTGGATGTCCAAAATTTAGCTTGCAGTGGAAAACACGCAGCACTA
GTAACAAAGCAGGGTGAGATTTTCTCCTGGGGTGAGGAATCAGGAGGCAGGCTTGGGCAT
GGTGTCGATTCTGATGTTTTGCATCCAAAGCTTATAGATTCCCTTGGCCATACAAACATT
GAGCTTGTTGCTTGTGGCGAAAATCATACTTGTGCCGTAACACTCTCTGGTGAACTGTAC
ACATGGGGTGCCGGTGATTTTGGTCTTCTTGGGCATGGGAATGAAGTTAGTCATTGGGTG
CCCAAAAGAGTAAATGGACCCTTAGAGGGCATCCATGTTTCTTATATCTCCTGTGGGCCC
TGGCATACAGCTGTGGTGACCTCTGCTGGCCAATTATTTACTTTCGGGGATGGAACTTTT
GGAGTTCTTGGTCATCGAGATAGAAAAAGTATTTCAAAACCCAGGGAAGTGGAATCTCTG
AAGGGGCTTCGAACTGTTCGAGCAGCTTGTGGGGTTTGGCATACTGCTGCAGTTGTTGAA
GTCATGGTGGGAAACTCTAGTTCAAGCAATTGTTCGTCGGGGAAACTTTTTACTTGGGGA
GATGGTGATAAAGGTCGACTGGGGCACGGTGATAAGGAGTCAAAACTTGTTCCTACTTGT
GTTGCAGCTCTTGTTGAACCCAACTTTTGCCAGGTTTCTTGTGGACACAGCTTGACAGTT
GCTCTAACTACTTCAGGTCATGTATATACAATGGGAAGCCCTGTATATGGCCAACTAGGT
CACCCTCAAGCTGATGGAAAGCTTCCTTGTCGGGTTGAAGGAAAACTTTCAAAGAGCTTT
GTGGAGGAAATAGCATGTGGTGCTTACCATGCTGCTGTATTGACTTCCCGAACTGAAGTT
TATACATGGGGAAAGGGAGCAAATGGAAGGTTGGGTCATGGTAATACAGATGACAGAAAC
TCTCCCACCTTAGTGGAAGCTTTAAAAGACAAGCAAGTCAAAAGTATTGCTTGTGGTACT
AATTTTACTGCAGCTATTTGCCTTCATAAATGGGCGTCAGGGGTTGACCAATCCATGTGT
TCTGGCTGCCGCCTTCCTTTTAATTTTAAAAGGAAGCGCCACAACTGTTATAACTGTGGT
CTTGTCTTTTGTCATTCATGCAGCAGCAAGAAATCACTGAGGGCATCAATGGCACCAAAT
CCCAATAAACTTTATCGTGTCTGTGATAACTGTTGTAATAAACTGAAAAAAGCTATTGAA
ACCGATGCTTCATCAGAGACTTCCATGAGTCGAAGAGGAAGCCTGAACCAGGGGTTAACT
GTTGGCATAGACAAAGATACTAAGTTGGATACAAGGTCTCGACCTCATCTTGCTAGATTT
TCTTCGATGGAGTCCTTCAAACAAGTTGAAAGCCGCTCTTCCAAACAGAAGAAAAAGTTT
GAATTCAACAGCAGTCGTGTCTCACCTATTCCCAGTAGTAACTCGCAATTGAGAGCTCTC
AATAGTTCTAAATCTTCTAATCCAGTTTTTGCGTCGTCCAAGAAGTTTTTCTCTGCTTCA
GTTCCCGGATCAAGGATTGTTTCTCGAGCAACATCACCAACATCTAGACAGCCCAGTCCA
CCTCGTTCTACTACACCAACTCCAACAGTGGGTGGACTTACATCTCCAAGGATTGTAGTG
GATGATGCTAAAAGGACAAATGAAAGTCTTGGTCAGGAGGTTGTTAAACTAAGATCACAG
GTGGAAACTCTTACACGCAAGGCTCAATTTCAAGAGGTAGAACTGGAAAGAACTAGTAAG
CAGCTGAAGGAGGCAATAGCAATTGCAGGGGAGGAGACTGCTAAATGCAAAGCAGCAAAA
GAAGTGATCAAATCACTTACTGCTCAGCTGAAGGAAATGGCTGAAAGGCTGCCTGTAGGT
CCCGCCCGGAACATCAAATCTCCTAAATCTGTTTCTTCCGAGTCCGATATTACCTCTAGT
GATATACCAAATGGCTGTATCGACCAAGTTCACAGTCAACTAACTTTTCAAGAACTGGAG
TCAAGTGTATCTAACAGCCATTTGCTTTCGAATGGATCAAGCAATGCCAGTAATCGTAGT
GCTGTTCACAATAGACAAGGGAATTCAGAGGCAACAACAAAAAATGGGGGCAGAACTAAA
GAATGTGATTCTCGTAACGAGAATGAATGGGTTGAGCAAGATGAGCCAGGTGTATATATT
ACTCTTACCTCCCTACCTGGAGGCGTCAAAGATCTTAAAAGGGTTCGCTTCAGTCGGAAG
CGGTTTAGTGAGAAACAGGCAGAACAATGGTGGGCAGAGAACCGTGCAAGAGTTTATGAG
CTCTACAATGTACGCGTGGTCGACAAGGCAAGTATTGGCACTGCAAGTGTGGATTTAGCA
CATTGA

Peptide Sequence

PEP ID

XP_016476687.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107798229 [Nicotiana tabacum]
Sequence

MNSDVNRASGTVERDIEQAITALKKGACLLKYGRRGKPKFCPFRLANDESALIWFSGKEE
KHLKLSHVSRIISGQRTPIFQRHPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLK
ALISRGHQRKWRTESRSDGVPSGATSPRTYTRRNSPLHSPFGSGDSSQKDGGDQLRLHSP
YGSPPKNGVNKAFSDIIHYSLPPKGLFTSDAASASIHSLSSGGSDSIHGQMKAMGMDNFR
VSLSSGVSSSSQGSGHDDGDALGDVFIWGEGTADGVLGGGPHRIGSCNGVKVDSLLPKAL
ESAVVLDVQNLACSGKHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLGHTNI
ELVACGENHTCAVTLSGELYTWGAGDFGLLGHGNEVSHWVPKRVNGPLEGIHVSYISCGP
WHTAVVTSAGQLFTFGDGTFGVLGHRDRKSISKPREVESLKGLRTVRAACGVWHTAAVVE
VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVAALVEPNFCQVSCGHSLTV
ALTTSGHVYTMGSPVYGQLGHPQADGKLPCRVEGKLSKSFVEEIACGAYHAAVLTSRTEV
YTWGKGANGRLGHGNTDDRNSPTLVEALKDKQVKSIACGTNFTAAICLHKWASGVDQSMC
SGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLRASMAPNPNKLYRVCDNCCNKLKKAIE
TDASSETSMSRRGSLNQGLTVGIDKDTKLDTRSRPHLARFSSMESFKQVESRSSKQKKKF
EFNSSRVSPIPSSNSQLRALNSSKSSNPVFASSKKFFSASVPGSRIVSRATSPTSRQPSP
PRSTTPTPTVGGLTSPRIVVDDAKRTNESLGQEVVKLRSQVETLTRKAQFQEVELERTSK
QLKEAIAIAGEETAKCKAAKEVIKSLTAQLKEMAERLPVGPARNIKSPKSVSSESDITSS
DIPNGCIDQVHSQLTFQELESSVSNSHLLSNGSSNASNRSAVHNRQGNSEATTKNGGRTK
ECDSRNENEWVEQDEPGVYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAENRARVYE
LYNVRVVDKASIGTASVDLAH

Transcript Sequence

Gene sequence data has not been registered.